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1

Acidification of subsurface coastal waters enhanced by eutrophication

Cai, Wei-Jun, Hu, Xinping, Huang, Wei-Jen, Murrell, Michael C., Lehrter, John C., Lohrenz, Steven E., Chou, Wen-Chen, Zhai, Weidong, Hollibaugh, James T., Wang, Yongchen, Zhao, Pingsan, Guo, Xianghui,

Journal:

Nature Geoscience

Year:

2011

Language:

english

File:

PDF, 694 KB

english, 2011

2

[IEEE 2011 Future of Instrumentation International Workshop (FIIW) - Oak Ridge, TN, USA (2011.11.7-2011.11.8)] 2011 Future of Instrumentation International Workshop (FIIW) Proceedings - Determining Total Solar Field Direct Normal Insolation

Kirkpatrick, T. Keith, Goedeke, Shawn M., Price, Dave, Pastorik, Bernie, Hollibaugh, James, Rosser, Jim

Year:

2011

Language:

english

File:

PDF, 938 KB

english, 2011

3

Alkane hydroxylase gene (alkB) phylotype composition and diversity in northern Gulf of Mexico bacterioplankton

Smith, Conor B., Tolar, Bradley B., Hollibaugh, James T., King, Gary M.

Journal:

Frontiers in Microbiology

Year:

2013

Language:

english

File:

PDF, 24 KB

english, 2013

4

Composition and Activity of Microbial Communities along the Redox Gradient of an Alkaline, Hypersaline, Lake

Edwardson, Christian F., Hollibaugh, James T.

Journal:

Frontiers in Microbiology

Year:

2018

Language:

english

File:

PDF, 14.55 MB

english, 2018

5

The microbial arsenic cycle in Mono Lake, California

Ronald S Oremland, John F Stolz, James T Hollibaugh

Journal:

FEMS Microbiology Ecology

Year:

2004

Language:

english

File:

PDF, 280 KB

english, 2004

6

Sulfate reduction and sediment metabolism in Tomales Bay, California

Randolph M. Chambers, James T. Hollibaugh, Sue M. Vink

Journal:

Biogeochemistry

Year:

1994

Language:

english

File:

PDF, 1.01 MB

english, 1994

7

Estimating denitrification rates in estuarine sediments: A comparison of stoichiometric and acetylene based methods

Samantha B. Joye, Stephen V. Smith, James T. Hollibaugh, Hans W. Paerl

Journal:

Biogeochemistry

Year:

1996

Language:

english

File:

PDF, 884 KB

english, 1996

8

Ascomycete fungal communities associated with early decaying leaves ofSpartinaspp. from central California estuaries

Justine I. Lyons, Merryl Alber, James T. Hollibaugh

Journal:

Year:

2010

Language:

english

File:

PDF, 291 KB

english, 2010

9

Sources, bioavailability, and photoreactivity of dissolved organic carbon in the Sacramento–San Joaquin River Delta

Ramunas Stepanauskas, Mary Ann Moran, Brian A. Bergamaschi, James T. Hollibaugh

Journal:

Biogeochemistry

Year:

2005

Language:

english

File:

PDF, 414 KB

english, 2005

10

Watershed nitrogen input and riverine export on the west coast of the US

Sylvia C. Schaefer, James T. Hollibaugh, Merryl Alber

Journal:

Biogeochemistry

Year:

2009

Language:

english

File:

PDF, 568 KB

english, 2009

11

Diel depth distributions of microbenthos in tidal creek sediments: high resolution mapping in fluorescently labeled embedded cores

Matthew R. First, James T. Hollibaugh

Journal:

Year:

2010

Language:

english

File:

PDF, 456 KB

english, 2010

12

Comparison of chitinolytic enzymes from an alkaline, hypersaline lake and an estuary

Gary R. LeCleir, Alison Buchan, John Maurer, Mary Ann Moran, James T. Hollibaugh

Journal:

Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 198 KB

english, 2007

13

Dominance of Mycoplasma in the guts of the Long-Jawed Mudsucker, Gillichthys mirabilis, from five California salt marshes

Nasreen Bano, Angelique DeRae Smith, William Bennett, Lydia Vasquez, James T. Hollibaugh

Journal:

Environmental Microbiology

Year:

2007

Language:

english

File:

PDF, 196 KB

english, 2007

14

Ammonia-oxidizing Archaea in the Arctic Ocean and Antarctic coastal waters

Karen M. Kalanetra, Nasreen Bano, James T. Hollibaugh

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 663 KB

english, 2009

15

Ciliate Ingestion and Digestion: Flow Cytometric Measurements and Regrowth of a Digestion-Resistant Campylobacter jejuni

Matthew R. First, Nina Y. Park, Mark E. Berrang, Richard J. Meinersmann, Joan M. Bernhard, Rebecca J. Gast, James T. Hollibaugh

Journal:

Journal of Eukaryotic Microbiology

Year:

2012

Language:

english

File:

PDF, 317 KB

english, 2012

16

The role of the microbial loop in Antarctic pelagic ecosystems

FAROOQ AZAM, DAVID C. SMITH, JAMES T. HOLLIBAUGH

Journal:

Year:

1991

Language:

english

File:

PDF, 407 KB

english, 1991

17

Arsenite-dependent photoautotrophy by an Ectothiorhodospira-dominated consortium

Budinoff, Charles R, Hollibaugh, James T

Journal:

The ISME Journal

Year:

2008

Language:

english

File:

PDF, 161 KB

english, 2008

18

Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia

Caffrey, Jane M, Bano, Nasreen, Kalanetra, Karen, Hollibaugh, James T

Journal:

The ISME Journal

Year:

2007

Language:

english

File:

PDF, 126 KB

english, 2007

19

Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage

Hollibaugh, James T, Gifford, Scott, Sharma, Shalabh, Bano, Nasreen, Moran, Mary Ann

Journal:

The ISME Journal

Year:

2010

Language:

english

File:

PDF, 814 KB

english, 2010

20

Stratification of microbial assemblages in Mono Lake, California, and response to a mixing event

James T. Hollibaugh, Patricia S. Wong, Nasreen Bano, Sunny K. Pak, Ellen M. Prager, Cristián Orrego

Journal:

Year:

2001

Language:

english

File:

PDF, 916 KB

english, 2001

21

Microbial Processes in the San Francisco Bay Estuarine Turbidity Maximum

James T. Hollibaugh and Patricia S. Wong

Journal:

Estuaries and Coasts

Year:

1999

Language:

english

File:

PDF, 2.93 MB

english, 1999

22

Community Metabolism in Microbial Mats: The Occurrence of Biologically-mediated Iron and Manganese Reduction

Samantha B. Joye, Mandy L. Mazzotta, James T. Hollibaugh

Journal:

Estuarine, Coastal and Shelf Science

Year:

1996

Language:

english

File:

PDF, 398 KB

english, 1996

23

Population growth away from the coastal zone: Thirty years of land use change and nutrient export in the Altamaha River, GA

Nathaniel B. Weston, James T. Hollibaugh, Samantha B. Joye

Journal:

Science of The Total Environment

Year:

2009

Language:

english

File:

PDF, 1.25 MB

english, 2009

24

FORMATION OF RESTING SPORES BY LEPTOCYLINDRUS DANICUS (BACILLARIOPHYCEAE) IN A CONTROLLED EXPERIMENTAL ECOSYSTEM

Curtiss O. Davis, James T. Hollibaugh, Don L. R. Seibert, William H. Thomas, Paul J. Harrison

Journal:

Journal of Phycology

Year:

1980

File:

PDF, 1.07 MB

1980

25

Diver-Operated Piston Corer for Nearshore Use

Francis J. Sansone, James T. Hollibaugh, Sue M. Vink, Randoph M. Chambers, Samantha B. Joye and Brian N. Popp

Journal:

Estuaries and Coasts

Year:

1994

Language:

english

File:

PDF, 517 KB

english, 1994

26

Microbial biomass and viral infections of heterotrophic prokaryotes in the sub-surface layer of the central Arctic Ocean

Grieg F. Steward, Laura B. Fandino, James T. Hollibaugh, Terry E. Whitledge, Farooq Azam

Journal:

Deep Sea Research Part I: Oceanographic Research Papers

Year:

2007

Language:

english

File:

PDF, 1.60 MB

english, 2007

27

Arsenic speciation in Mono Lake, California: Response to seasonal stratification and anoxia

James T. Hollibaugh, Steve Carini, Hakan Gürleyük, Robert Jellison, Samantha B. Joye, Gary LeCleir, Christof Meile, Lydia Vasquez, Dirk Wallschläger

Journal:

Geochimica et Cosmochimica Acta

Year:

2005

Language:

english

File:

PDF, 913 KB

english, 2005

28

Stress protein expression in Ampelisca abdita (Amphipoda) exposed to sediments from San Francisco Bay

Ingeborg Werner, Kurt F. Kline, James T. Hollibaugh

Journal:

Marine Environmental Research

Year:

1998

Language:

english

File:

PDF, 1.11 MB

english, 1998

29

Degradation of algal lipids in microcosm sediments with different mixing regimes

Ming-Yi Sun, Wei-Jun Cai, Samantha B. Joye, Haibing Ding, Jihong Dai, James T. Hollibaugh

Journal:

Organic Geochemistry

Year:

2002

Language:

english

File:

PDF, 694 KB

english, 2002

30

Effects of heavy metals on the morphology of some marine phytoplankton*

Thomas, William H., Hollibaugh, James T., Seibert, Don L. R.

Journal:

Year:

1980

Language:

english

File:

PDF, 275 KB

english, 1980

31

Microbial communities of the carapace, gut, and hemolymph of the Atlantic blue crab,Callinectes sapidus

Carrie E. Givens, Karen G. Burnett, Louis E. Burnett, James T. Hollibaugh

Journal:

Year:

2013

Language:

english

File:

PDF, 624 KB

english, 2013

32

Succession of Hydrocarbon-Degrading Bacteria in the Aftermath of the Deepwater Horizon Oil Spill in the Gulf of Mexico

Dubinsky, Eric A., Conrad, Mark E., Chakraborty, Romy, Bill, Markus, Borglin, Sharon E., Hollibaugh, James T., Mason, Olivia U., M. Piceno, Yvette, Reid, Francine C., Stringfellow, William T., Tom, La

Journal:

Environmental Science & Technology

Year:

2013

Language:

english

File:

PDF, 1.65 MB

english, 2013

33

Dissimilatory Antimonate Reduction and Production of Antimony Trioxide Microcrystals by a Novel Microorganism

Abin, Christopher A., Hollibaugh, James T.

Journal:

Environmental Science & Technology

Year:

2014

Language:

english

File:

PDF, 1.29 MB

english, 2014

34

Ascomycete Fungal Communities Associated with Early Decaying Leaves of Spartina spp. from Central California Estuaries

Justine I. Lyons, Merryl Alber and James T. Hollibaugh

Journal:

Year:

2010

Language:

english

File:

PDF, 1.17 MB

english, 2010

35

Temporal dynamics and depth variations of dissolved free amino acids and polyamines in coastal seawater determined by high-performance liquid chromatography

Lu, Xinxin, Zou, Long, Clevinger, Curtis, Liu, Qian, Hollibaugh, James T., Mou, Xiaozhen

Journal:

Marine Chemistry

Year:

2014

Language:

english

File:

PDF, 526 KB

english, 2014

36

A New Role for Sulfur in Arsenic Cycling

Fisher, Jenny C., Wallschläger, Dirk, Planer-Friedrich, Britta, Hollibaugh, James T.

Journal:

Environmental Science & Technology

Year:

2008

Language:

english

File:

PDF, 126 KB

english, 2008

37

Single-cell genomics shedding light on marine Thaumarchaeota diversification

Luo, Haiwei, Tolar, Bradley B, Swan, Brandon K, Zhang, Chuanlun L, Stepanauskas, Ramunas, Ann Moran, Mary, Hollibaugh, James T

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 684 KB

english, 2014

38

Part 2: Eutrophication of Freshwater and Marine Ecosystems || Water, Salt, and Nutrient Exchanges in San Francisco Bay

Stephen V. Smith and James T. Hollibaugh

Journal:

Limnology and Oceanography

Year:

2006

Language:

english

File:

PDF, 2.63 MB

english, 2006

39

Potamocorbula amurensis: Comparison of Clearance Rates and Assimilation Efficiencies for Phytoplankton and Bacterioplankton

Ingeborg Werner and James T. Hollibaugh

Journal:

Limnology and Oceanography

Year:

1993

Language:

english

File:

PDF, 1.79 MB

english, 1993

40

Ecophysiology of a Mono Lake Picocyanobacterium

Charles R. Budinoff and James T. Hollibaugh

Journal:

Limnology and Oceanography

Year:

2007

Language:

english

File:

PDF, 1.99 MB

english, 2007

41

Dynamic Bacterial and Viral Response to an Algal Bloom at Subzero Temperatures

Patricia L. Yager, Tara L. Connelly, Behzad Mortazavi, K. Eric Wommack, Nasreen Bano, James E. Bauer, Stephen Opsahl and James T. Hollibaugh

Journal:

Limnology and Oceanography

Year:

2001

Language:

english

File:

PDF, 1.99 MB

english, 2001

42

Seasonal variation in the metratranscriptomes of a Thaumarchaeota population from SE USA coastal waters

Hollibaugh, James T, Gifford, Scott M, Moran, Mary Ann, Ross, Meredith J, Sharma, Shalabh, Tolar, Bradley B

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 2.25 MB

english, 2014

43

Watershed nitrogen input and riverine export on the west coast of the US

Sylvia C. Schaefer, James T. Hollibaugh and Merryl Alber

Journal:

Biogeochemistry

Year:

2009

Language:

english

File:

PDF, 1.83 MB

english, 2009

44

A microarray for assessing transcription from pelagic marine microbial taxa

Shilova, Irina N, Robidart, Julie C, James Tripp, H, Turk-Kubo, Kendra, Wawrik, Boris, Post, Anton F, Thompson, Anne W, Ward, Bess, Hollibaugh, James T, Millard, Andy, Ostrowski, Martin, J Scanlan, Da

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 3.21 MB

english, 2014

45

Measurement of in situ rates of selenate removal by dissimilatory bacterial reduction in sediments

Oremland, Ronald S., Steinberg, Nisan A., Maest, Ann S., Miller, Laurence G., Hollibaugh, James T.

Journal:

Environmental Science & Technology

Year:

1990

Language:

english

File:

PDF, 1.54 MB

english, 1990

46

Response of Sediment Bacterial Assemblages To Selenate and Acetate Amendments

Lucas, Françoise S., Hollibaugh, James T.

Journal:

Environmental Science & Technology

Year:

2001

Language:

english

File:

PDF, 146 KB

english, 2001

47

Ethanol-extractable substrate pools and the incorporation of thymidine, L -leucine, and other substrates by bacterioplankton

Hollibaugh, James T., Wong, Patricia S.

Journal:

Canadian Journal of Microbiology

Year:

1992

Language:

english

File:

PDF, 777 KB

english, 1992

48

Oxidative Transformation of Trithioarsenate Along Alkaline Geothermal Drainages—Abiotic versus Microbially Mediated Processes

Planer-Friedrich, Britta, Fisher, Jenny C., Hollibaugh, James T., Süß, Elke, Wallschläger, Dirk

Journal:

Geomicrobiology

Year:

2009

Language:

english

File:

PDF, 1.06 MB

english, 2009

49

Temporal and Vertical Distributions of Bacterioplankton at the Gray's Reef National Marine Sanctuary

Lu, Xinxin, Sun, Shulei, Zhang, Yu-Qin, Hollibaugh, James T., Mou, Xiaozhen, Löffler, F. E.

Journal:

Applied and Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 630 KB

english, 2015

50

Contribution of Bacterial Cell Wall Components to DOM in Alkaline, Hypersaline Mono Lake, California

J⊘rgensen, Niels O. G., Engel, Pernille, Jellison, Robert, Hollibaugh, James T.

Journal:

Geomicrobiology

Year:

2008

Language:

english

File:

PDF, 1.83 MB

english, 2008